Gene detail information of Glyur000879s00025350 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G52280.1 | 3.00E-147 | Myosin heavy chain-related protein |
| NR | XP_006589546.1 | 0 | PREDICTED: spindle pole body protein pcp1-like [Glycine max] |
| trEMBL | tr|I1LDS0|I1LDS0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G38060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00879 | 36851 | 41899 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000879s00025350.1 | PF10358.4 | NT-C2 | 7 | 135 | 2.60E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.061 |
| SRR1783600 | control | 11.086 |
| SRR1783602 | moderate drought stress | 6.524 |
| SRR1811619 | moderate drought stress | 6.469 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.394 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.395 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.800 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.112 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.728 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.784 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.431 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.208 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.794 |
| SRR2868004 | Drought Stress (root) | 20.409 |
| SRR2967015 | Control (root) | 23.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.505 |
| SRR9715740 | Leaf | 3.548 |
| SRR9715741 | Leaf | 4.543 |
| SRR9715739 | Root | 0.469 |
| SRR9715742 | Root | 1.479 |
| SRR9715743 | Root | 1.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.428 |
| SRR8749028 | MeJA induced 9h | 0.871 |
| SRR8749029 | MeJA induced 9h | 1.164 |
| SRR8749030 | Uninduced | 0.365 |
| SRR8749031 | Uninduced | 0.064 |
| SRR8749032 | Uninduced | 0.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.760 |
| SRR8400027 | Control - Root | 17.773 |