Gene detail information of Glyur000879s00025344 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003555376.1 | 6.21E-20 | PREDICTED: 25.3 kDa vesicle transport protein-like [Glycine max] |
| trEMBL | tr|K7N3P5|K7N3P5_SOYBN | 2.00E-20 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G29721.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00879 | 9175 | 10927 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.088 |
| SRR1783600 | control | 2.488 |
| SRR1783602 | moderate drought stress | 2.324 |
| SRR1811619 | moderate drought stress | 2.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.370 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.318 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.023 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.141 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.940 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.767 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.692 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.287 |
| SRR2868004 | Drought Stress (root) | 1.973 |
| SRR2967015 | Control (root) | 2.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.414 |
| SRR9715740 | Leaf | 0.358 |
| SRR9715741 | Leaf | 0.170 |
| SRR9715739 | Root | 0.046 |
| SRR9715742 | Root | 0.633 |
| SRR9715743 | Root | 0.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.283 |
| SRR8749028 | MeJA induced 9h | 0.168 |
| SRR8749029 | MeJA induced 9h | 0.047 |
| SRR8749030 | Uninduced | 0.422 |
| SRR8749031 | Uninduced | 0.241 |
| SRR8749032 | Uninduced | 0.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.019 |
| SRR8400027 | Control - Root | 0.513 |