Gene detail information of Glyur000879s00025343 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004496837.1 | 2.80E-46 | PREDICTED: transcription factor LAF1-like [Cicer arietinum] |
| trEMBL | tr|E5RT64|E5RT64_LUPAL | 3.00E-43 | R2R3-MYB transcription factor {ECO:0000313|EMBL:BAJ61443.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00879 | 7689 | 10226 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.653 |
| SRR1783600 | control | 0.673 |
| SRR1783602 | moderate drought stress | 0.512 |
| SRR1811619 | moderate drought stress | 0.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.423 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.012 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.606 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.235 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.973 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.143 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.454 |
| SRR2868004 | Drought Stress (root) | 17.895 |
| SRR2967015 | Control (root) | 14.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.363 |
| SRR9715740 | Leaf | 0.029 |
| SRR9715741 | Leaf | 0.419 |
| SRR9715739 | Root | 0.050 |
| SRR9715742 | Root | 0.335 |
| SRR9715743 | Root | 0.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.396 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.530 |
| SRR8749031 | Uninduced | 0.368 |
| SRR8749032 | Uninduced | 0.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.008 |
| SRR8400027 | Control - Root | 0.966 |