Gene detail information of Glyur000878s00027525 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G05205.1 | 6.00E-37 | |
| NR | NP_001239673.1 | 1.32E-55 | uncharacterized protein LOC100797450 [Glycine max] |
| trEMBL | tr|C6TFH3|C6TFH3_SOYBN | 5.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G32040.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00878 | 59379 | 61129 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 44.562 |
| SRR1783600 | control | 45.034 |
| SRR1783602 | moderate drought stress | 24.684 |
| SRR1811619 | moderate drought stress | 24.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 50.152 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 50.329 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.246 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 17.121 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 39.093 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 39.847 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.492 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 101.714 |
| SRR2868004 | Drought Stress (root) | 74.137 |
| SRR2967015 | Control (root) | 70.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 51.647 |
| SRR9715740 | Leaf | 41.805 |
| SRR9715741 | Leaf | 46.187 |
| SRR9715739 | Root | 21.001 |
| SRR9715742 | Root | 33.695 |
| SRR9715743 | Root | 35.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 84.236 |
| SRR8749028 | MeJA induced 9h | 50.211 |
| SRR8749029 | MeJA induced 9h | 63.453 |
| SRR8749030 | Uninduced | 26.063 |
| SRR8749031 | Uninduced | 17.327 |
| SRR8749032 | Uninduced | 25.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 90.384 |
| SRR8400027 | Control - Root | 106.402 |