Gene detail

Gene detail information of Glyur000877s00023926.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G33650.1	dynamin-related protein 3A
NR	XP_006583773.1	PREDICTED: dynamin-related protein 3A-like [Glycine max]
Swissprot	tr\|Q8S944\|DRP3A_ARATH	Dynamin-related protein 3A
trEMBL	tr\|K7L2I2\|K7L2I2_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G30150.2}

Sequence

Transcript Sequence

>Glyur000877s00023926.1
ATGGCGGTGGTGGCGGATGAGGCCCCACTGGGATCGTCCGTCATCTCGCTGGTGAACAAGCTGCAGGACATCTTCAGCTGCGTTGGAAGCCAGTCGACGATCGACCTCCCTCAGGTTGCGGTGGTCGGAAGCCAGAGCAGCGGCAAGTCCAGCGTCCTCGAAGCCCTCGTCGGCCGCGACTTCCTCCCCCGCGGCAACGACATCTGCACCCGAAGACCCCTCGTCCTCCAACTCGTCCACACCAAACCCTCCCAACCCGACTTCGCCGAGTTCCTCCACCTCCCTGGCCGCACCTTCCACGACTTCTCCCAAATCCGTGCCGAAATCCAGGCTGAGACTGATAGGGAAGCGGGAGGGAACAAAGGCGTATCTGATAAACAGATTCGTCTGAAGATTTTCTCGCCCAATGTTCTCGATATCACGCTCGTGGATCTCCCTGGCTTAACCAAGGTTCCCGTTGGTGACCAGCCTTCTGATATTGAAGCCCGAATTAGAACCATGATCATGTCCTACATCAAAGTCCCCACTTGTCTCATTCTCGCCGTCACGCCCGCTAATTCCGATTTGGCCAATTCGGACGCTCTTCAGATGGCTGGAATTGCTGATCCTGATGGTAAAAGAACGATAGGTGTCATCACTAAGTTGGATATCATGGACAGAGGTACTGATGCCCGGAATCTGTTACTAGGAAAAGTTATTCCCCTCCGTCTTGGTTATGTCGGTGTTGTAAACCGTAGTCAGGAGGATATTCTGATGAACCNGAGTATAAAGGATGCTCTTGTTGCAGAAGAGAAGTTTTTCCGCAGTCATCCTGTATACAGTGGTCTAGCTGATAGTTGTGGTGTTCCTCAATTGGCAAAGAAGTTGAACAAGATTCTTGCACAACATATCATGGCTGTGCTACCAGGGCTGAAAGCACGTATAAGCACTTCACTGGTAGCTCTTGCGAAAGAACATGCAAGCTATGGGGAAATCACAGAGTCCAAGGCATGTGCTGGACAGGGTGCTCTTATCCTGAATTTTCTTTCAAAATACTGTGACGCATTCTCCTCCATGGTAGAGGGAAAAAATGAGGCGATGTCTACATCTGAGCTATCTGGTGGAGCACGAATTCATTATATTTTTCAATCCATCTTTGTGAGGAGTTTAGAGGAGGTGGATCCATGTGAAGACTTGACTGATGANGATATTCGTATTGCCATACAGAATGCAACTGGACCTAAATCAGCGCTGTTTGTTCCAGAAGTCCCATTTGAAGTCCTTATACGAAGGCAAATATCTCGGCTATTGGATCCAAGTCTTCAATGTGCCAGGTTTATATATGACGAGTTAATGAAGATCAGCCATCGCTGTATGGTGACTGAACTGCAGCGATTCCCTTTCTTGAGAAAGCGCATGGATGAAGTTATTGGGAACTTTTTACGAGAAGGCCTTGAACCCTCAGAGACTATGATCACACACATAATAGAAATGGAGATGGACTACATAAACACTTCCCACCCAAATTTTATTGGTGGAAGCAAAGCATTAGAAGCTGCAGTGCAACAATGCAAGTCTTCTTCAGTTTCTCTACCAGTTTCTAGGGCAAAGGATGCTTTAGAATCTGACAAGGGACTGGCTTCCTCCGAAAGAAGTGGGAAGTCTCGAGCTTTTCTGGCAAGGCATGCAAATGGAGTAGTGGCTGATCATGGTGTTCGTGCTGCATCAGATGTTGAAAAAGTAGTACCCTTGGCAAACACTGGTGGATCTAATTGGGGGATCTCATCCATTTTTGGTGGAGGTGATAACCGTGCGTCTGCGAAGGAGAATACAGCTAGTAAACCGCATTATGAACCAGTTCAAAGTTTACAGTCATCCTCTACAATTCATTTGAGAGAGCCCCCTCCTGTCTTGAGGCCATCTGAGAGAAGTTCAGAGACAGAAGCTGTTGAAATTACAGTAACAAAGTTGCTTTTGAGGTCATACTATGACATTGTCAGAAAAAATGTTGAGGATCTTGTTCCCAAGGCAATTATGCACTTCTTGGTAAATAACACAAAGAGAGAGCTGCACAATGTCTTCATTGGAAAGCTATATAGAGAGGATCTGTTTGAAGAGATGTTGCAAGAACCTAATGAGATATCTGTGAAAAGAAAGCACTGTCGAGAACTGCTCCGAGCTTATCAACAGGCTTTTAGGGACTTGGACGAACTACCTCTTGAAGCAGAAACAGTTGAAATGGGATACAGTTCGCCTGAAACAGCTGGCTTGCCTAAAATTCGCGGATTGCCAACTTCATCTATGTATTCTACTAGCAGCTCGGGAGACAACATCTAAGAAGTTCGTGTGTTCTCCCAAAGAACCCAAAAACCTCAATCACCAGTGCATGCTAATGTAGACTCAAATGGAAGTTGAGGAACTTACATGTCAGGTTTTAATCCCATGGCCAACGCCCAAGGAATTTGACCGAGTATTTTACTCATGTTTATGCTTAAGCAATTTTTGGGGTTTGGAACTCTGCCTCTGGAGCTGGACTGCATTCAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00877	368	7408	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K17065	DNM1L	EC:3.6.5.5	TNF signaling pathway	map04668
			Mitophagy - yeast	map04139
			Apoptosis - fly	map04214
			NOD-like receptor signaling pathway	map04621

Gene Ontology

molecular_function

GO:0003924 GTPase activity

GO:0005525 GTP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000877s00023926.1	PF00350.18	Dynamin_N	39	215	1.50E-51
Glyur000877s00023926.1	PF01031.15	Dynamin_M	224	515	2.30E-99
Glyur000877s00023926.1	PF02212.13	GED	641	731	1.10E-35

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.474
SRR1783600	control	7.547
SRR1783602	moderate drought stress	12.227
SRR1811619	moderate drought stress	11.525

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.647
DRR006520	Root Summer glycyrrhizin high producing strain	9.623
DRR006521	Root Winter glycyrrhizin high producing strain	16.450
DRR006522	Root Winter glycyrrhizin high producing strain	16.503
DRR006523	Root Summer glycyrrhizin low producing strain	8.865
DRR006524	Root Summer glycyrrhizin low producing strain	8.772
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.612
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.771

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.506
SRR2868004	Drought Stress (root)	14.463
SRR2967015	Control (root)	13.832

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.101
SRR9715740	Leaf	9.246
SRR9715741	Leaf	11.521
SRR9715739	Root	3.841
SRR9715742	Root	13.026
SRR9715743	Root	12.153

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	9.020
SRR8749028	MeJA induced 9h	8.468
SRR8749029	MeJA induced 9h	8.395
SRR8749030	Uninduced	5.878
SRR8749031	Uninduced	6.876
SRR8749032	Uninduced	7.238

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.528
SRR8400027	Control - Root	15.344