Gene detail information of Glyur000876s00020503 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004516890.1 | 2.90E-14 | PREDICTED: probable rRNA-processing protein EBP2 homolog isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9LUJ5|EBP2_ARATH | 6.00E-10 | Probable rRNA-processing protein EBP2 homolog |
| trEMBL | tr|V7BG01|V7BG01_PHAVU | 4.00E-14 | Uncharacterized protein {ECO:0000313|EMBL:ESW16727.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00876 | 77134 | 77357 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.677 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.424 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.251 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.363 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.302 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.207 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.025 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.134 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.511 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |