Gene detail

Gene detail information of Glyur000876s00020496

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G55390.2	0	ENHANCED DOWNY MILDEW 2
NR	XP_004500121.1	0	PREDICTED: uncharacterized protein LOC101504069 isoform X1 [Cicer arietinum]
Swissprot	tr\|Q39214\|RPM1_ARATH	8.00E-11	Disease resistance protein RPM1
trEMBL	tr\|I1N0G1\|I1N0G1_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G09610.1}

Sequence

Transcript Sequence

>Glyur000876s00020496.1
TGAACACTACAAGCTGATCCAATGTTCCAAACCAAAGTGAAAGGGTGATAGAGAAAGGGTGGCAGAAGCACACGATTTCAATTTTCAGGAACCAATAGCATACCACTTATTAGGGACTCTTGCAGCGATTTCGGTTTGTGGCTGGCTCCTTGCATTGCAGCGATAAATAGAGAATGGGGGTCGCAGATAGAAGAAAGGAGAAATAGGGGGTCGCAGTTTTAACTTTGAAGAGGAATAGAAGATTGAAGAGCAATAGACGAAGATTTAAGGAGAAAAAGATGACGATTGAAGAGGAACAGGGGTCGCAAAATGAAGTGTAACGTTGCAGTCTTGCAGATGGAGTTTGAACCCTAGATCGAAAATTCTGAACACGGGACAGCGGTTTGCCTTTTGCCAAGCAGGGAGCGGCAGAAACCTTCGGGAAGAGTTGCAAAAGGAAGAGGGGGAAAAGTTTCGTCGTAGCACGGACTCTGTGAGACTGTGATTCGCAAAATCATCGCTGCGTTGCGTTCGTTGTCGTACAAGGTGTTGAGTAGTTAGGATTTGGGGTTGAAAAGAAGGAACATGGCGTCTTCGGATGATGAGGTTGATACTCAGCCACTATCTGTGTCAAATTACCATTTTGTTGACGATAGAGATGTGCCTGTATCTTTTTCTGTGNTGCCAATCAAGTGGAGTGAGTCTGAGAGTCTTGATGGCAAGAAAGAGAAGGTGTTCCTGCATGGTGTGGCGGATAATGGGCTGCAGAAAATTTTCATGCAAGTCATAGCATGGAGGTTTGATCTTTCCTATGTGAAGCCTGAGATATCAGTGCTATCAAAGGATGGGAGATGGGTCAAACTTCTAAAGCCAAGAAAGAGCTATGAGGATACCATAAGGACTGTATTGATCACCGTTCACTTCCTGCATTATGTGAAGAAGAATCCTGACATATCTGCTAAATCTGCCAAATCTGTGTGGGATAACTTGAGTAAGAATAAGGAGTTTAGCTCTTATGAGGTTAAGCCTTCACAAAATGATTTATTAAACCACATGGCTTTAATGAGTGAAGCTGCCGAAAGGGATGCTGTCTTAGCAAAGTCCAAGCTTTTGCTCATGGTTCTGGAAGATAAGGATAAGATGAGGATTAAGAAACTTTCTGATGAGCAAGTTAAAGATTTAGCACGACCTGGATTTATAATTGATGATGTTGACAATGATATGATTGATGANACTGTTGAAGAGTCAGATGAAGAGGAAGAGTTGTTCGATTCTGTTTGTGCGATATGTGACAATGGTGGTGAACTTATGTGTTGTGATGGAAAGTGCATGAGGTCATTTCATGCTAATGAGGAGGATGGTGAGGACTCTTCTTGTGTCTCTCTTGGTTTCACCCGCAAGGAAGTTGATGAGATCCAAAATTTCTATTGTAAGAATTGTCAATATAATAAGCACCAGTGCTTTGCATGTGGCACACTAGGCTGTTCAGATAAATTTTCGGGTGCTGAGGTCTTCAAATGTGCATCTGCAACCTGTGGCTTCTTTTATCATCCACATTGTGTTGCAAAGTTACTTCACCAGGTGGTTGAGGATGCTCCAGTGGAACTTGTGAGAAATATAGCTAGGGGAGAGCCTTTTACTTGTCCTGCTCATTATTGCTGTAACTGTAAAGAAATGGAAAACAAGCAGGAACATGAGTTACAATTTGCTGTTTGTAGGCGTTGTCCCAAGTCATATCATCGTAAATGTTTGCCAAGAGAGATTGCTTTTGACGACAATGAGGATGAAGATCTTATAACGAGGGCTTGGGAAGGACTTTTACCAAACAATCGCATTCTTATATATTGCATAAAGCATGAGATAGATGATGAACTTGGGACTCCTATAAGAGATCATATAAAATTCCCCAATGTTAAAGCTACTATTCGAGAAATTAATACTGAGGAGAAGACAAAGCTTGCAACCAAAGAGAGAGTTATATTGAACAAGAGCAATGTTGAATTAGATAATTTACTTGACAAAAGAACCATTGCTAAAGTATCTAAACTCTCTGGTAAAATGTCTTCTGGGAAAGTTGGTATCAAGAAGTCTGGAAAGATTTCTGAAACAAATATCTCTAAGAAGAAAGCAAATGAAGCATCAAGAAGGTGTTTGAATGAAAATAAGAGATCAATCTCAAAGGAAACTGAAAGGTCTGATTATGAGGAAAACCGGCCCTCATTGGGTGAGAATTTATATGCTTACTACTTTCAGAAGGGTTCTGAGCAAGTTAATTCTGGCACTCAGGTTGGTAATGTAGCTGATAACAGCCTGTCTGTTAAGTCTACTAGAAATCTGAGTAATGCATCACCCCTATTAGATGCAGATTCAGAGAGGAGATTGTCAGCTTTGTTTAAAGAAGCTATGTCATCAATTACTATGGAGAATGTCATAAAAGAACATAAATTTGCTTCTACTCATACTCACTCGTTGAAAAATGTTGTGGAGAAGACCATTACAGTGGGGAAGTTGGAAGGGTCAGTTGAGGCTGTTCGAACAGCTTTAAGGATGCTCGATGANGGGCATAGCATTCGGGATGCAGAAGCTGTTTGTGGCCCTGATGTTCTAAACCAGATATTCAAGTGGAAGGATAAGTTGAAAGTATATCTTGCACCCGTTCTTATTGGTAATCGCTACACATCATATGGTCGCCATTTTACACAAGTGGAAAAGCTGGAAGGGATTGTCGATAAACTCCATTGGTATGTTCAGAATGGTGATACAAATGATTTTAATTTTGAGATGAGAGATTGGATGACTGTCCAACGAAAAGAGTTGCCTCCAGGGTCGCAGTTGATCATGGGCCTTAATCCCCCCTTTGGGCTTAAAGCAGCTTTGGCCAACAAGTTTATCGATAAGGCTTTAGGGTTTCAACCGAAGCTCCTNATTCTTATAGTACCACCAGACACAGAGAGGCTAGATAACAAACGGTCGCCATATGATCTTATCTGGGAGGATGAGAGCTTTCTATCAGGCAAGTCATTTTATCTACCTGGATCAGTTGATTCTAATGACAAGCAAATGGAGCAATGGAATGTAAGGCCACCCCCACTCTACCTTTGGAGCCGTCCAGACTGGACTGNTAAGCATAAGATCATAGCCCAGGAGCATGGTCACCTGTTCAGCCAGCATGAAGTATCAAAAATGGAAGGCTTTGATAATGAAAAATCATCTGCCAGTCATACGATGGAATTGGATGATAACTATGGTGATGATATCATGCTGGGTCGTGATTTCTTGATGTCACTTGATGATGAAGATCNCCCATCTATGAATGAAGGCCAGATAGAAAGCTCATCTCATGGAACTAATGAGCGAGAGAGTCAAGCTCAAGCTGAGAATNCCTCATCGACGAGGAAACGAACTGAGGGAAATGATGGAAGAGGACCAGCTGTTGCCTCACCAGCCAAAAGGCAGGCTATAAATGAAATGCCTGAGGGAAAACTGGACCATAATGTCTTCAATCCACTTGATGGGAGACCCTCAGTTGAAGTATTTCAGCCCATATCTGATANGATACCTCCGGATATTGAGGCTGGTGATCATGGTTATGGGCATTTGGAGCCCAACTCTTCCTCACGTATGGAGTTTGGAGCAGCCTATGATGGGACCCAACAATGGCCAAGTGTTGCCAATCCCCGTTCTGATTATGGGATGGAGGAACACCATAGCAGACTTCTGGGAGACAGAACAAATAGCCTTGGATATAGACCACCCTATATTAGGGAGGATGATAGATACCCGAGGGAGTTAGAGACAAGGCAACAGATTTACCACCACGGGCTNCAGAATCCGGATCCTATGAGGAGCAGTAATTATATATCTGGTCATGATCCTGCTTATAGCCATATGGGATCTAGTTATTCGGTACGTGGTCCAGGATATGAGCCATCTTTCATGATTGATACACCAGCTATGCAACGATANGCACCTCGCTTTGATGAATTAAACCATGTCAGAATGGATTCTCTGGGGTCTGAACCTCCTATAATTGGTAGAAGTGGCACTTCTGAACGTAGTGTGCCCCAACCTCAACCTGGATATGGAAATGGGCTGCCAATGCCAGGTTCTGCAGCTGGTCGTCACCATTTGTATTCACGCCAGAATTTAGCAGGTTGGTTCGTAATGGAAATGATCACCTACATGAGAGATGAATTAGAAAATATTCAAGCCTTCATTTATGATGCATATAGATTGGCTGCAGCTAAAGAAGACAACACAAAAGATGGAATCAAGAAACAGGTGAAGCGGCTGATAGAAGCAGCTTTCCNCATGGAAGATGTCATTGATGACTATATGATCTGGGAGGAACGACATCCTTGTGATCCTGGATTGAGAAACTACTTGCGGCACAAGAGGTATGTTGTCTTCTTTGACGACGTATGGAGTACACATTTTTGGGATGAGATTGAATATGCTGTAATTGATAACAAAAATGGAAGTAGGATATTTATCACAACAAGGAATATGGATGTTGCAATGTATTGTAAAAGATCTTCTTTTGTTGAAGTGCACGAGGTGCAACCTTTAATTGAAAAACAATCTCTAGAGTTGTTCTATTCGAAGGCATTCCAATCTGACTTCAAGGGAAATATTCTAAAGGATCTCATAGATAAAGGGTTTAGGAACCTCAAGCAACTAGTACTCAGACGCTTGTATAATTTGAAATTCATCTCCATGGGTGGACAAGGAGCACTGTCTTCTCTTGAGAGGTTCAAGCTGGTTAGCATCTCCCAACTGAAGGAGGTGCCTTTTGGTGTCTACAACTTACCAATGCTTCAAGCTTTCCCTGCCATCAATATGCCTTATGAGTTTGAGCAAAGCATTGATCGTGCTAGAGGTCAACAACACCAATGGATCATTGAGCAGGAACGCGAGTGCTACAGAACTTAG

Protein Sequence

>Glyur000876s00020496.1
MASSDDEVDTQPLSVSNYHFVDDRDVPVSFSVXPIKWSESESLDGKKEKVFLHGVADNGLQKIFMQVIAWRFDLSYVKPEISVLSKDGRWVKLLKPRKSYEDTIRTVLITVHFLHYVKKNPDISAKSAKSVWDNLSKNKEFSSYEVKPSQNDLLNHMALMSEAAERDAVLAKSKLLLMVLEDKDKMRIKKLSDEQVKDLARPGFIIDDVDNDMIDXTVEESDEEEELFDSVCAICDNGGELMCCDGKCMRSFHANEEDGEDSSCVSLGFTRKEVDEIQNFYCKNCQYNKHQCFACGTLGCSDKFSGAEVFKCASATCGFFYHPHCVAKLLHQVVEDAPVELVRNIARGEPFTCPAHYCCNCKEMENKQEHELQFAVCRRCPKSYHRKCLPREIAFDDNEDEDLITRAWEGLLPNNRILIYCIKHEIDDELGTPIRDHIKFPNVKATIREINTEEKTKLATKERVILNKSNVELDNLLDKRTIAKVSKLSGKMSSGKVGIKKSGKISETNISKKKANEASRRCLNENKRSISKETERSDYEENRPSLGENLYAYYFQKGSEQVNSGTQVGNVADNSLSVKSTRNLSNASPLLDADSERRLSALFKEAMSSITMENVIKEHKFASTHTHSLKNVVEKTITVGKLEGSVEAVRTALRMLDXGHSIRDAEAVCGPDVLNQIFKWKDKLKVYLAPVLIGNRYTSYGRHFTQVEKLEGIVDKLHWYVQNGDTNDFNFEMRDWMTVQRKELPPGSQLIMGLNPPFGLKAALANKFIDKALGFQPKLLILIVPPDTERLDNKRSPYDLIWEDESFLSGKSFYLPGSVDSNDKQMEQWNVRPPPLYLWSRPDWTXKHKIIAQEHGHLFSQHEVSKMEGFDNEKSSASHTMELDDNYGDDIMLGRDFLMSLDDEDXPSMNEGQIESSSHGTNERESQAQAENXSSTRKRTEGNDGRGPAVASPAKRQAINEMPEGKLDHNVFNPLDGRPSVEVFQPISDXIPPDIEAGDHGYGHLEPNSSSRMEFGAAYDGTQQWPSVANPRSDYGMEEHHSRLLGDRTNSLGYRPPYIREDDRYPRELETRQQIYHHGLQNPDPMRSSNYISGHDPAYSHMGSSYSVRGPGYEPSFMIDTPAMQRXAPRFDELNHVRMDSLGSEPPIIGRSGTSERSVPQPQPGYGNGLPMPGSAAGRHHLYSRQNLAGWFVMEMITYMRDELENIQAFIYDAYRLAAAKEDNTKDGIKKQVKRLIEAAFXMEDVIDDYMIWEERHPCDPGLRNYLRHKRYVVFFDDVWSTHFWDEIEYAVIDNKNGSRIFITTRNMDVAMYCKRSSFVEVHEVQPLIEKQSLELFYSKAFQSDFKGNILKDLIDKGFRNLKQLVLRRLYNLKFISMGGQGALSSLERFKLVSISQLKEVPFGVYNLPMLQAFPAINMPYEFEQSIDRARGQQHQWIIEQERECYRT

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00876	38805	53262	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0005515 protein binding

GO:0008270 zinc ion binding

GO:0043531 ADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000876s00020496.1	PF12047.3	DNMT1-RFD	11	131	1.60E-18
Glyur000876s00020496.1	PF00931.17	NB-ARC	1262	1345	2.40E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.208
SRR1783600	control	10.181
SRR1783602	moderate drought stress	15.253
SRR1811619	moderate drought stress	14.976

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.305
DRR006520	Root Summer glycyrrhizin high producing strain	11.481
DRR006521	Root Winter glycyrrhizin high producing strain	5.929
DRR006522	Root Winter glycyrrhizin high producing strain	5.591
DRR006523	Root Summer glycyrrhizin low producing strain	10.020
DRR006524	Root Summer glycyrrhizin low producing strain	9.992
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.247
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.192

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	16.145
SRR2868004	Drought Stress (root)	18.614
SRR2967015	Control (root)	20.746

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.129
SRR9715740	Leaf	14.872
SRR9715741	Leaf	13.552
SRR9715739	Root	3.003
SRR9715742	Root	12.973
SRR9715743	Root	10.921

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	5.141
SRR8749028	MeJA induced 9h	9.558
SRR8749029	MeJA induced 9h	3.387
SRR8749030	Uninduced	3.181
SRR8749031	Uninduced	1.569
SRR8749032	Uninduced	1.562

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	18.289
SRR8400027	Control - Root	18.129