Gene detail information of Glyur000876s00020492 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48485.1 | 3.00E-14 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | KHN28416.1 | 3.41E-44 | Putative lipid-transfer protein DIR1 [Glycine soja] |
| Swissprot | tr|Q8W453|DIRL1_ARATH | 3.00E-18 | Putative lipid-transfer protein DIR1 (Precursor) |
| trEMBL | tr|V7BKM7|V7BKM7_PHAVU | 1.00E-43 | Uncharacterized protein {ECO:0000313|EMBL:ESW18544.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00876 | 25760 | 26188 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000876s00020492.1 | PF14368.1 | LTP_2 | 34 | 104 | 4.30E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.752 |
| SRR1783600 | control | 0.749 |
| SRR1783602 | moderate drought stress | 0.469 |
| SRR1811619 | moderate drought stress | 0.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.347 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.601 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.501 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 70.891 |
| SRR2868004 | Drought Stress (root) | 25.405 |
| SRR2967015 | Control (root) | 20.056 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.201 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.026 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.054 |
| SRR8400027 | Control - Root | 2.698 |