Gene detail information of Glyur000876s00020486 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47650.1 | 3.00E-05 | UDP-xylose synthase 4 |
| NR | XP_007139995.1 | 1.68E-24 | hypothetical protein PHAVU_008G076000g [Phaseolus vulgaris] |
| Swissprot | tr|Q4PSA3|MA659_ARATH | 1.00E-06 | 65-kDa microtubule-associated protein 9 |
| trEMBL | tr|V7B2D8|V7B2D8_PHAVU | 6.00E-25 | Uncharacterized protein {ECO:0000313|EMBL:ESW11989.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00876 | 10389 | 15481 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.948 |
| SRR1811619 | moderate drought stress | 1.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.712 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.930 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.177 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.088 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.095 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.742 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.376 |
| SRR2868004 | Drought Stress (root) | 23.583 |
| SRR2967015 | Control (root) | 24.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.163 |
| SRR9715740 | Leaf | 1.292 |
| SRR9715741 | Leaf | 1.577 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.574 |
| SRR9715743 | Root | 0.904 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.412 |
| SRR8749028 | MeJA induced 9h | 9.176 |
| SRR8749029 | MeJA induced 9h | 5.041 |
| SRR8749030 | Uninduced | 12.519 |
| SRR8749031 | Uninduced | 12.247 |
| SRR8749032 | Uninduced | 5.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.576 |
| SRR8400027 | Control - Root | 0.419 |