Gene detail information of Glyur000875s00029469 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67050.1 | 2.00E-25 | |
| NR | XP_003624341.1 | 2.79E-91 | hypothetical protein MTR_7g082180 [Medicago truncatula] |
| trEMBL | tr|G7KUA9|G7KUA9_MEDTR | 1.00E-91 | Uncharacterized protein {ECO:0000313|EMBL:AES80559.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00875 | 65363 | 66124 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.675 |
| SRR1783600 | control | 7.665 |
| SRR1783602 | moderate drought stress | 8.481 |
| SRR1811619 | moderate drought stress | 8.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.136 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.365 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.344 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.315 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.619 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.828 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.072 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.645 |
| SRR2868004 | Drought Stress (root) | 16.860 |
| SRR2967015 | Control (root) | 16.244 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.570 |
| SRR9715740 | Leaf | 1.193 |
| SRR9715741 | Leaf | 1.894 |
| SRR9715739 | Root | 1.640 |
| SRR9715742 | Root | 1.175 |
| SRR9715743 | Root | 1.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.824 |
| SRR8749028 | MeJA induced 9h | 1.448 |
| SRR8749029 | MeJA induced 9h | 0.724 |
| SRR8749030 | Uninduced | 7.964 |
| SRR8749031 | Uninduced | 5.265 |
| SRR8749032 | Uninduced | 2.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.189 |
| SRR8400027 | Control - Root | 9.476 |