Gene detail information of Glyur000875s00029459 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67030.1 | 7.00E-15 | zinc finger protein 6 |
| NR | XP_004492954.1 | 1.17E-39 | PREDICTED: zinc finger protein 6-like [Cicer arietinum] |
| Swissprot | tr|Q39265|ZFP6_ARATH | 2.00E-28 | Zinc finger protein 6 |
| trEMBL | tr|I1N5A8|I1N5A8_SOYBN | 2.00E-35 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G53300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00875 | 2378 | 2938 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.913 |
| SRR1783600 | control | 1.632 |
| SRR1783602 | moderate drought stress | 1.802 |
| SRR1811619 | moderate drought stress | 2.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.317 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.326 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.627 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.490 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.689 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.592 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.083 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.252 |
| SRR2868004 | Drought Stress (root) | 7.821 |
| SRR2967015 | Control (root) | 9.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.429 |
| SRR9715742 | Root | 0.520 |
| SRR9715743 | Root | 0.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.111 |
| SRR8749028 | MeJA induced 9h | 0.580 |
| SRR8749029 | MeJA induced 9h | 0.464 |
| SRR8749030 | Uninduced | 0.282 |
| SRR8749031 | Uninduced | 0.137 |
| SRR8749032 | Uninduced | 0.723 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.471 |
| SRR8400027 | Control - Root | 28.441 |