Gene detail information of Glyur000871s00042151 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004503151.1 | 1.91E-12 | PREDICTED: protein FIZZY-RELATED 3-like [Cicer arietinum] |
| trEMBL | tr|Q6UZ79|Q6UZ79_MEDTR | 1.00E-10 | B-type cell cycle switch protein ccs52B {ECO:0000313|EMBL:AAQ72359.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00871 | 32539 | 33570 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.032 |
| SRR1783600 | control | 6.125 |
| SRR1783602 | moderate drought stress | 11.224 |
| SRR1811619 | moderate drought stress | 11.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.609 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.698 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.003 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.966 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.097 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.214 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.389 |
| SRR2868004 | Drought Stress (root) | 0.345 |
| SRR2967015 | Control (root) | 0.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.826 |
| SRR9715740 | Leaf | 2.503 |
| SRR9715741 | Leaf | 1.380 |
| SRR9715739 | Root | 2.486 |
| SRR9715742 | Root | 0.696 |
| SRR9715743 | Root | 1.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.564 |
| SRR8400027 | Control - Root | 4.304 |