Gene detail information of Glyur000868s00033656 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G10522.2 | 2.00E-52 | |
| NR | KHN47595.1 | 1.06E-88 | hypothetical protein glysoja_041311 [Glycine soja] |
| trEMBL | tr|K7MRU6|K7MRU6_SOYBN | 4.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G17600.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00868 | 49135 | 51083 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.481 |
| SRR1783600 | control | 7.605 |
| SRR1783602 | moderate drought stress | 3.262 |
| SRR1811619 | moderate drought stress | 3.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.806 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.577 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.898 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.417 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.914 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.315 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.301 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.756 |
| SRR2868004 | Drought Stress (root) | 5.457 |
| SRR2967015 | Control (root) | 5.702 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.349 |
| SRR9715740 | Leaf | 15.974 |
| SRR9715741 | Leaf | 7.941 |
| SRR9715739 | Root | 2.710 |
| SRR9715742 | Root | 1.977 |
| SRR9715743 | Root | 1.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.672 |
| SRR8749028 | MeJA induced 9h | 2.872 |
| SRR8749029 | MeJA induced 9h | 2.118 |
| SRR8749030 | Uninduced | 1.882 |
| SRR8749031 | Uninduced | 0.199 |
| SRR8749032 | Uninduced | 0.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.341 |
| SRR8400027 | Control - Root | 5.712 |