Gene detail information of Glyur000868s00033652 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G13750.1 | 0 | Purple acid phosphatases superfamily protein |
| NR | XP_004509875.1 | 0 | PREDICTED: probable inactive purple acid phosphatase 1-like [Cicer arietinum] |
| COG | YP_003998166.1 | 2.00E-18 | metallophosphoesterase [Leadbetterella byssophila DSM 17132] |
| Swissprot | tr|Q9LMX4|PPA1_ARATH | 0 | Probable inactive purple acid phosphatase 1 (Precursor) |
| trEMBL | tr|K7MRU1|K7MRU1_SOYBN | 0 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00868 | 32300 | 38382 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000868s00033652.1 | PF00149.23 | Metallophos | 291 | 494 | 1.70E-14 |
| Glyur000868s00033652.1 | PF14008.1 | Metallophos_C | 519 | 579 | 1.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 32.609 |
| SRR1783600 | control | 32.621 |
| SRR1783602 | moderate drought stress | 19.584 |
| SRR1811619 | moderate drought stress | 19.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.127 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.671 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.487 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.240 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.486 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.334 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.594 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.685 |
| SRR2868004 | Drought Stress (root) | 20.481 |
| SRR2967015 | Control (root) | 22.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.869 |
| SRR9715740 | Leaf | 7.056 |
| SRR9715741 | Leaf | 5.679 |
| SRR9715739 | Root | 9.639 |
| SRR9715742 | Root | 7.850 |
| SRR9715743 | Root | 6.500 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.670 |
| SRR8749028 | MeJA induced 9h | 9.663 |
| SRR8749029 | MeJA induced 9h | 10.772 |
| SRR8749030 | Uninduced | 2.255 |
| SRR8749031 | Uninduced | 1.002 |
| SRR8749032 | Uninduced | 1.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 25.807 |
| SRR8400027 | Control - Root | 33.050 |