Gene detail information of Glyur000867s00025579.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G08080.1 | 5.00E-31 | alpha carbonic anhydrase 7 |
| NR | XP_003541987.1 | 5.15E-49 | PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Glycine max] |
| COG | YP_419944.1 | 1.00E-14 | carbonic anhydrase [Magnetospirillum magneticum AMB-1] |
| Swissprot | tr|Q8L817|ATCA7_ARATH | 6.00E-37 | Alpha carbonic anhydrase 7 (Precursor) |
| trEMBL | tr|I1M4I7|I1M4I7_SOYBN | 2.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G39920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00867 | 6549 | 7588 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01674 | cah | EC:4.2.1.1 | Nitrogen metabolism | map00910 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000867s00025579.1 | PF00194.16 | Carb_anhydrase | 11 | 107 | 3.80E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.269 |
| SRR1783600 | control | 0.303 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.163 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.305 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.303 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.133 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.692 |
| SRR2868004 | Drought Stress (root) | 0.785 |
| SRR2967015 | Control (root) | 1.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.078 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.287 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.238 |
| SRR8749028 | MeJA induced 9h | 0.007 |
| SRR8749029 | MeJA induced 9h | 0.003 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.029 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.581 |
| SRR8400027 | Control - Root | 0.624 |