Gene detail information of Glyur000867s00025578 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51740.1 | 4.00E-49 | Peptidase family M48 family protein |
| NR | XP_003534034.1 | 7.94E-79 | PREDICTED: uncharacterized protein LOC100799127 [Glycine max] |
| COG | YP_006256669.1 | 1.00E-12 | Peptidase family M48 [Solitalea canadensis DSM 3403] |
| trEMBL | tr|I1L3I9|I1L3I9_SOYBN | 3.00E-79 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G27860.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00867 | 5740 | 13988 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000867s00025578.2 | PF01435.13 | Peptidase_M48 | 153 | 237 | 2.00E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.583 |
| SRR1783600 | control | 1.589 |
| SRR1783602 | moderate drought stress | 2.144 |
| SRR1811619 | moderate drought stress | 2.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.202 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.224 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.662 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.712 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.754 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.847 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.334 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.310 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.625 |
| SRR2868004 | Drought Stress (root) | 4.317 |
| SRR2967015 | Control (root) | 4.913 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.555 |
| SRR9715740 | Leaf | 2.917 |
| SRR9715741 | Leaf | 2.720 |
| SRR9715739 | Root | 0.349 |
| SRR9715742 | Root | 1.046 |
| SRR9715743 | Root | 1.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.203 |
| SRR8749028 | MeJA induced 9h | 3.211 |
| SRR8749029 | MeJA induced 9h | 1.406 |
| SRR8749030 | Uninduced | 1.965 |
| SRR8749031 | Uninduced | 0.898 |
| SRR8749032 | Uninduced | 0.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.279 |
| SRR8400027 | Control - Root | 7.746 |