Gene detail information of Glyur000866s00031718 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003595510.1 | 1.39E-08 | Replication protein A 70 kDa DNA-binding subunit [Medicago truncatula] |
| trEMBL | tr|G7IGJ6|G7IGJ6_MEDTR | 5.00E-09 | Replication factor-A carboxy-terminal domain protein {ECO:0000313|EMBL:AES65761.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00866 | 89426 | 93174 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.658 |
| SRR1783600 | control | 9.349 |
| SRR1783602 | moderate drought stress | 10.395 |
| SRR1811619 | moderate drought stress | 9.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.267 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.375 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.975 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.714 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.280 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.742 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.449 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.626 |
| SRR2868004 | Drought Stress (root) | 6.971 |
| SRR2967015 | Control (root) | 4.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.053 |
| SRR9715740 | Leaf | 0.043 |
| SRR9715741 | Leaf | 0.101 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.358 |
| SRR8749028 | MeJA induced 9h | 12.015 |
| SRR8749029 | MeJA induced 9h | 11.092 |
| SRR8749030 | Uninduced | 12.432 |
| SRR8749031 | Uninduced | 13.200 |
| SRR8749032 | Uninduced | 11.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.011 |
| SRR8400027 | Control - Root | 0.010 |