Gene detail information of Glyur000866s00031708.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G17900.1 | 1.00E-86 | PLATZ transcription factor family protein |
| NR | XP_004512521.1 | 4.42E-158 | PREDICTED: uncharacterized protein LOC101498018 [Cicer arietinum] |
| trEMBL | tr|G7KDS6|G7KDS6_MEDTR | 4.00E-158 | PLATZ transcription factor family protein {ECO:0000313|EMBL:AES95843.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00866 | 27041 | 30158 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | PLATZ |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000866s00031708.1 | PF04640.9 | PLATZ | 89 | 160 | 5.40E-41 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.310 |
| SRR1783600 | control | 41.227 |
| SRR1783602 | moderate drought stress | 96.600 |
| SRR1811619 | moderate drought stress | 95.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 63.988 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 62.999 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 200.882 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 197.031 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 104.103 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 104.888 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 34.862 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 34.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 76.243 |
| SRR2868004 | Drought Stress (root) | 158.175 |
| SRR2967015 | Control (root) | 203.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 202.230 |
| SRR9715740 | Leaf | 125.554 |
| SRR9715741 | Leaf | 198.916 |
| SRR9715739 | Root | 35.030 |
| SRR9715742 | Root | 132.812 |
| SRR9715743 | Root | 116.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 146.188 |
| SRR8749028 | MeJA induced 9h | 353.844 |
| SRR8749029 | MeJA induced 9h | 317.039 |
| SRR8749030 | Uninduced | 49.661 |
| SRR8749031 | Uninduced | 73.619 |
| SRR8749032 | Uninduced | 97.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 79.535 |
| SRR8400027 | Control - Root | 70.921 |