Gene detail information of Glyur000865s00029157 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26761.1 | 8.00E-112 | Arabinanase/levansucrase/invertase |
| NR | XP_007153568.1 | 0 | hypothetical protein PHAVU_003G046500g [Phaseolus vulgaris] |
| COG | YP_007167016.1 | 6.00E-42 | hypothetical protein PCC7418_0574 [Halothece sp. PCC 7418] |
| trEMBL | tr|V7C5U7|V7C5U7_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW25562.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00865 | 52193 | 53693 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.863 |
| SRR1783600 | control | 3.722 |
| SRR1783602 | moderate drought stress | 4.189 |
| SRR1811619 | moderate drought stress | 4.198 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.083 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.988 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.166 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.093 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.836 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.577 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.282 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.105 |
| SRR2868004 | Drought Stress (root) | 5.987 |
| SRR2967015 | Control (root) | 5.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.312 |
| SRR9715740 | Leaf | 19.325 |
| SRR9715741 | Leaf | 14.459 |
| SRR9715739 | Root | 2.797 |
| SRR9715742 | Root | 3.535 |
| SRR9715743 | Root | 3.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.648 |
| SRR8749028 | MeJA induced 9h | 1.970 |
| SRR8749029 | MeJA induced 9h | 0.958 |
| SRR8749030 | Uninduced | 0.485 |
| SRR8749031 | Uninduced | 0.162 |
| SRR8749032 | Uninduced | 0.196 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.121 |
| SRR8400027 | Control - Root | 8.296 |