Gene detail information of Glyur000865s00029154 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52220.1 | 4.00E-56 | |
| NR | XP_007157708.1 | 6.43E-120 | hypothetical protein PHAVU_002G091600g [Phaseolus vulgaris] |
| trEMBL | tr|V7CHP2|V7CHP2_PHAVU | 2.00E-120 | Uncharacterized protein {ECO:0000313|EMBL:ESW29702.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00865 | 37896 | 40805 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000865s00029154.1 | PF10159.4 | MMtag | 8 | 85 | 1.90E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.286 |
| SRR1783600 | control | 28.574 |
| SRR1783602 | moderate drought stress | 27.714 |
| SRR1811619 | moderate drought stress | 27.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 46.135 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 45.139 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 55.512 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 53.692 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.121 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 53.643 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.390 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 51.007 |
| SRR2868004 | Drought Stress (root) | 55.933 |
| SRR2967015 | Control (root) | 50.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 29.123 |
| SRR9715740 | Leaf | 32.298 |
| SRR9715741 | Leaf | 33.127 |
| SRR9715739 | Root | 3.366 |
| SRR9715742 | Root | 21.576 |
| SRR9715743 | Root | 16.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 95.585 |
| SRR8749028 | MeJA induced 9h | 56.195 |
| SRR8749029 | MeJA induced 9h | 103.950 |
| SRR8749030 | Uninduced | 101.033 |
| SRR8749031 | Uninduced | 145.788 |
| SRR8749032 | Uninduced | 90.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 45.639 |
| SRR8400027 | Control - Root | 41.050 |