Gene detail information of Glyur000865s00029153.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14020.1 | 0 | O-fucosyltransferase family protein |
| NR | XP_003516276.1 | 0 | PREDICTED: uncharacterized protein At1g04910-like [Glycine max] |
| Swissprot | tr|Q8W486|Y1491_ARATH | 9.00E-76 | Uncharacterized protein At1g04910 |
| trEMBL | tr|K7K1X8|K7K1X8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G06281.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00865 | 24749 | 29926 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000865s00029153.1 | PF10250.4 | O-FucT | 102 | 410 | 5.20E-88 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.054 |
| SRR1783600 | control | 4.926 |
| SRR1783602 | moderate drought stress | 3.106 |
| SRR1811619 | moderate drought stress | 3.081 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.161 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.250 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.623 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.557 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.490 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.265 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.615 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.531 |
| SRR2868004 | Drought Stress (root) | 8.643 |
| SRR2967015 | Control (root) | 9.461 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.356 |
| SRR9715740 | Leaf | 4.961 |
| SRR9715741 | Leaf | 4.638 |
| SRR9715739 | Root | 1.670 |
| SRR9715742 | Root | 3.710 |
| SRR9715743 | Root | 3.593 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.587 |
| SRR8749028 | MeJA induced 9h | 2.897 |
| SRR8749029 | MeJA induced 9h | 3.565 |
| SRR8749030 | Uninduced | 4.013 |
| SRR8749031 | Uninduced | 2.296 |
| SRR8749032 | Uninduced | 1.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.451 |
| SRR8400027 | Control - Root | 10.023 |