Gene detail information of Glyur000864s00030247 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02010.1 | 1.00E-103 | RHO guanyl-nucleotide exchange factor 7 |
| NR | XP_004490928.1 | 1.42E-160 | PREDICTED: rop guanine nucleotide exchange factor 1-like [Cicer arietinum] |
| Swissprot | tr|Q9LZN0|ROGF7_ARATH | 4.00E-123 | Rop guanine nucleotide exchange factor 7 |
| trEMBL | tr|A0A059D6J8|A0A059D6J8_EUCGR | 2.00E-158 | Uncharacterized protein {ECO:0000313|EMBL:KCW86026.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00864 | 10740 | 14767 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000864s00030247.1 | PF03759.8 | PRONE | 101 | 191 | 1.40E-43 |
| Glyur000864s00030247.1 | PF03759.8 | PRONE | 192 | 329 | 1.50E-60 |
| Glyur000864s00030247.1 | PF03759.8 | PRONE | 330 | 367 | 5.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.615 |
| SRR1783600 | control | 1.648 |
| SRR1783602 | moderate drought stress | 1.030 |
| SRR1811619 | moderate drought stress | 1.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.511 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.232 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.525 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.415 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.041 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.297 |
| SRR2868004 | Drought Stress (root) | 3.086 |
| SRR2967015 | Control (root) | 4.587 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.692 |
| SRR9715740 | Leaf | 0.033 |
| SRR9715741 | Leaf | 0.483 |
| SRR9715739 | Root | 0.054 |
| SRR9715742 | Root | 0.460 |
| SRR9715743 | Root | 0.506 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.205 |
| SRR8749028 | MeJA induced 9h | 0.100 |
| SRR8749029 | MeJA induced 9h | 0.044 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.020 |
| SRR8749032 | Uninduced | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.900 |
| SRR8400027 | Control - Root | 7.663 |