Gene detail information of Glyur000862s00041451 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36290.1 | 7.00E-134 | alpha/beta-Hydrolases superfamily protein |
| NR | KHN14995.1 | 0 | hypothetical protein glysoja_037122 [Glycine soja] |
| COG | YP_005886341.1 | 3.00E-20 | alpha/beta hydrolase fold protein [Marinobacter adhaerens HP15] |
| trEMBL | tr|I1LZJ5|I1LZJ5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G22040.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00862 | 12423 | 18141 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000862s00041451.1 | PF12697.2 | Abhydrolase_6 | 98 | 358 | 2.00E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 60.053 |
| SRR1783600 | control | 60.376 |
| SRR1783602 | moderate drought stress | 45.248 |
| SRR1811619 | moderate drought stress | 44.968 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 64.769 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 63.752 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 69.913 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 68.571 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 52.918 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 52.234 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.936 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.770 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 39.643 |
| SRR2868004 | Drought Stress (root) | 31.877 |
| SRR2967015 | Control (root) | 32.778 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.483 |
| SRR9715740 | Leaf | 26.497 |
| SRR9715741 | Leaf | 33.473 |
| SRR9715739 | Root | 44.896 |
| SRR9715742 | Root | 55.361 |
| SRR9715743 | Root | 52.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.061 |
| SRR8749028 | MeJA induced 9h | 22.690 |
| SRR8749029 | MeJA induced 9h | 13.021 |
| SRR8749030 | Uninduced | 7.655 |
| SRR8749031 | Uninduced | 4.828 |
| SRR8749032 | Uninduced | 5.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.663 |
| SRR8400027 | Control - Root | 40.787 |