Gene detail information of Glyur000861s00034113 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21110.1 | 4.00E-72 | G10 family protein |
| NR | NP_001237676.1 | 1.68E-99 | uncharacterized protein LOC100305597 [Glycine max] |
| Swissprot | tr|Q65WT0|BD31B_ORYSJ | 1.00E-93 | Protein BUD31 homolog 2 |
| trEMBL | tr|V7CRX0|V7CRX0_PHAVU | 6.00E-100 | Uncharacterized protein {ECO:0000313|EMBL:ESW32942.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00861 | 49531 | 54055 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000861s00034113.1 | PF01125.12 | G10 | 1 | 143 | 5.60E-58 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.626 |
| SRR1783600 | control | 12.770 |
| SRR1783602 | moderate drought stress | 13.315 |
| SRR1811619 | moderate drought stress | 7.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.922 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.893 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.987 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.440 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.593 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.510 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.606 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.821 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.486 |
| SRR2868004 | Drought Stress (root) | 9.114 |
| SRR2967015 | Control (root) | 8.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.589 |
| SRR9715740 | Leaf | 6.404 |
| SRR9715741 | Leaf | 5.452 |
| SRR9715739 | Root | 12.664 |
| SRR9715742 | Root | 11.168 |
| SRR9715743 | Root | 9.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 74.079 |
| SRR8749028 | MeJA induced 9h | 38.005 |
| SRR8749029 | MeJA induced 9h | 52.553 |
| SRR8749030 | Uninduced | 19.492 |
| SRR8749031 | Uninduced | 34.132 |
| SRR8749032 | Uninduced | 21.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.655 |
| SRR8400027 | Control - Root | 11.597 |