Gene detail

Gene detail information of Glyur000860s00039262

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G16710.1	2.00E-99	dehydroascorbate reductase 1
NR	ACU21042.1	8.29E-166	unknown [Glycine max]
COG	YP_007096787.1	5.00E-20	glutathione S-transferase [Chamaesiphon minutus PCC 6605]
Swissprot	tr\|Q8LE52\|DHAR3_ARATH	3.00E-124	Glutathione S-transferase DHAR3, chloroplastic (Precursor)
trEMBL	tr\|C6TGU0\|C6TGU0_SOYBN	3.00E-166	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G04510.1}

Sequence

Transcript Sequence

>Glyur000860s00039262.1
CTTTTTGCCGGGAACAAAACGCAACCACATTAGCGTCATCTCTGGTTCGAAGCTACAAACTAACGGAAACGGTGCCAAATGTCCACCGCCAGAATTCAAGTTTCGGCGTGCGCGGTGTCCGCCACCGTCAACCACCTTCGCCTCCNCCCAAACGGCATCGTTTCAGGCAGCTGCTTCAACAACCATTTCAACTCCAAAAAACCCCTCAGGATTAAGAAGCCCCTCAGCCTCAGAGTGTCAATGTCTTCGGTTCCTCCTTCCGAACCCTTCGAAATCGCCGTCAAAGCTTCCGTTTCCACTCCCAACAGGCTCGGCGACTGTCCTTTTTGCCAAAGGGTATTGCTGACACTGGAGGAAAAACATCTACCTTATGACCCGAAGTTTGTGGATTTAACCAACAAGCCAGAATGGTTCCTTAAAATNAATCCTGAAGGTAAAGTTCCTGTGATAAAGTTCGATGAGAAGTGGGTTCCAGACTCAGATGNTATCACACAAACATTGGAAGAGAAGTATCCTAGCCCACCACTTGTGACCCCACCGGAAAAGGCTACAGCTGGGTCAAAGATATTTTCTACATTTATAGGATTCCTCAAGAGCAAAGATCCCAATGATGGAACAGAGCAAGCATTACTAAATGAACTGAGCTCTTTCAATGATTACCTCAAGGAAAATGGTCCTTTTGTCAATNGGGAAGACATATCTGCAGCTGACCTGTCACTTGGACCAAAGCTATACCATTTGGAGATTGCTTTGGGGCATTATAAGAAATGGACAGTACCTGANTCACTTAGCTTTTTGAAGTCTTATATGAAGGCTATTTTCTCGAGGGAATCATTCATTAAAACACGTGCACAACCCCAAGATGTCATTGAAGGTTGGCGTCCTAAAGTGGAGGGCTGATATCCACTCATGCTTCTCCCTTATTAGCTTGAAACTCTCTCTCAGAGGACTACACCCCACTCTAGTTGAGTATATAAATTCAGCAGCATTCCATCAAGAGTTGAAGACCTGTATCGTTTTGTATTGTAGCTTTGATAAGTCACCATGGACTAAAGGATAATTTGTCTTTTAAGAATAGTTGGCCACATATTGTAACTTGTTTAGTAGGGAGGCCAAAGAAGACTGCATATAGAGAGGATTTCCAACTCAACAGAC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00860	73054	77874	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000860s00039262.1	PF13417.1	GST_N_3	80	149	2.30E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	20.805
SRR1783600	control	20.880
SRR1783602	moderate drought stress	17.254
SRR1811619	moderate drought stress	17.401

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	20.004
DRR006520	Root Summer glycyrrhizin high producing strain	19.816
DRR006521	Root Winter glycyrrhizin high producing strain	16.454
DRR006522	Root Winter glycyrrhizin high producing strain	16.233
DRR006523	Root Summer glycyrrhizin low producing strain	13.920
DRR006524	Root Summer glycyrrhizin low producing strain	14.654
DRR006525	Leaf Summer glycyrrhizin high producing strain	230.325
DRR006526	Leaf Summer glycyrrhizin high producing strain	228.591

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.819
SRR2868004	Drought Stress (root)	7.158
SRR2967015	Control (root)	5.323

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	61.345
SRR9715740	Leaf	108.776
SRR9715741	Leaf	43.636
SRR9715739	Root	2.734
SRR9715742	Root	5.724
SRR9715743	Root	5.067

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.585
SRR8749028	MeJA induced 9h	40.008
SRR8749029	MeJA induced 9h	22.020
SRR8749030	Uninduced	47.772
SRR8749031	Uninduced	27.117
SRR8749032	Uninduced	23.733

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	22.708
SRR8400027	Control - Root	18.078