Gene detail information of Glyur000858s00035416 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G11070.2 | 2.00E-10 | WRKY family transcription factor |
| NR | XP_003526692.1 | 1.07E-74 | PREDICTED: probable WRKY transcription factor 53-like [Glycine max] |
| Swissprot | tr|Q9SUP6|WRK53_ARATH | 1.00E-12 | Probable WRKY transcription factor 53 |
| trEMBL | tr|I1KAM9|I1KAM9_SOYBN | 4.00E-75 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G13090.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00858 | 92874 | 94512 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000858s00035416.1 | PF03106.10 | WRKY | 26 | 55 | 6.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.753 |
| SRR1783600 | control | 0.669 |
| SRR1783602 | moderate drought stress | 0.640 |
| SRR1811619 | moderate drought stress | 0.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.708 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.640 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.411 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.419 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 17.435 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.824 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.340 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.335 |
| SRR2868004 | Drought Stress (root) | 2.009 |
| SRR2967015 | Control (root) | 1.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 114.668 |
| SRR9715740 | Leaf | 26.520 |
| SRR9715741 | Leaf | 145.645 |
| SRR9715739 | Root | 5.290 |
| SRR9715742 | Root | 32.303 |
| SRR9715743 | Root | 25.316 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.696 |
| SRR8749028 | MeJA induced 9h | 1.779 |
| SRR8749029 | MeJA induced 9h | 1.535 |
| SRR8749030 | Uninduced | 32.591 |
| SRR8749031 | Uninduced | 2.900 |
| SRR8749032 | Uninduced | 9.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.624 |
| SRR8400027 | Control - Root | 4.756 |