Gene detail information of Glyur000858s00035410 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53190.1 | 1.00E-43 | Nodulin MtN3 family protein |
| NR | XP_003526694.1 | 2.99E-91 | PREDICTED: bidirectional sugar transporter SWEET3-like [Glycine max] |
| Swissprot | tr|Q6NQN5|SWET3_ARATH | 2.00E-52 | Bidirectional sugar transporter SWEET3 |
| trEMBL | tr|I1KAN3|I1KAN3_SOYBN | 1.00E-91 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G13110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00858 | 27492 | 29806 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000858s00035410.1 | PF03083.11 | MtN3_slv | 6 | 91 | 8.70E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.161 |
| SRR1783600 | control | 0.110 |
| SRR1783602 | moderate drought stress | 0.121 |
| SRR1811619 | moderate drought stress | 0.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.757 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.588 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.165 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.136 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.871 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.817 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.547 |
| SRR2868004 | Drought Stress (root) | 122.158 |
| SRR2967015 | Control (root) | 124.633 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.100 |
| SRR9715740 | Leaf | 0.553 |
| SRR9715741 | Leaf | 2.724 |
| SRR9715739 | Root | 0.568 |
| SRR9715742 | Root | 6.693 |
| SRR9715743 | Root | 5.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.701 |
| SRR8749028 | MeJA induced 9h | 1.831 |
| SRR8749029 | MeJA induced 9h | 24.357 |
| SRR8749030 | Uninduced | 13.428 |
| SRR8749031 | Uninduced | 48.437 |
| SRR8749032 | Uninduced | 90.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.525 |
| SRR8400027 | Control - Root | 3.853 |