Gene detail information of Glyur000853s00029672 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06145.1 | 1.00E-33 | |
| NR | XP_007154127.1 | 2.30E-98 | hypothetical protein PHAVU_003G092600g [Phaseolus vulgaris] |
| trEMBL | tr|V7CB41|V7CB41_PHAVU | 9.00E-99 | Uncharacterized protein {ECO:0000313|EMBL:ESW26121.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00853 | 80016 | 80513 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.449 |
| SRR1783600 | control | 1.330 |
| SRR1783602 | moderate drought stress | 1.181 |
| SRR1811619 | moderate drought stress | 1.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.758 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.440 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.793 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.531 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.358 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.333 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.865 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.029 |
| SRR2868004 | Drought Stress (root) | 7.116 |
| SRR2967015 | Control (root) | 9.916 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.655 |
| SRR9715740 | Leaf | 0.382 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 3.341 |
| SRR9715742 | Root | 1.060 |
| SRR9715743 | Root | 0.219 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.287 |
| SRR8749028 | MeJA induced 9h | 0.253 |
| SRR8749029 | MeJA induced 9h | 0.482 |
| SRR8749030 | Uninduced | 0.289 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.262 |
| SRR8400027 | Control - Root | 14.265 |