Gene detail information of Glyur000853s00029669 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G06150.1 | 3.00E-87 | |
| NR | XP_003550508.1 | 1.69E-132 | PREDICTED: uncharacterized protein LOC100777897 [Glycine max] |
| trEMBL | tr|I1MR92|I1MR92_SOYBN | 6.00E-133 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G02060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00853 | 70679 | 73045 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.974 |
| SRR1783600 | control | 16.794 |
| SRR1783602 | moderate drought stress | 18.807 |
| SRR1811619 | moderate drought stress | 18.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.460 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.061 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.676 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.092 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.387 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.848 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.997 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.608 |
| SRR2868004 | Drought Stress (root) | 9.922 |
| SRR2967015 | Control (root) | 11.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.687 |
| SRR9715740 | Leaf | 11.660 |
| SRR9715741 | Leaf | 7.036 |
| SRR9715739 | Root | 17.067 |
| SRR9715742 | Root | 14.567 |
| SRR9715743 | Root | 16.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.997 |
| SRR8749028 | MeJA induced 9h | 3.016 |
| SRR8749029 | MeJA induced 9h | 2.366 |
| SRR8749030 | Uninduced | 2.220 |
| SRR8749031 | Uninduced | 0.435 |
| SRR8749032 | Uninduced | 0.647 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.076 |
| SRR8400027 | Control - Root | 28.881 |