Gene detail information of Glyur000853s00029667 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G19050.1 | 2.00E-125 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004508370.1 | 0 | PREDICTED: UPF0613 protein PB24D3.06c-like isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1KN85|I1KN85_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G38630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00853 | 59664 | 65794 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000853s00029667.1 | PF08538.5 | DUF1749 | 61 | 300 | 7.60E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.726 |
| SRR1783600 | control | 12.458 |
| SRR1783602 | moderate drought stress | 9.707 |
| SRR1811619 | moderate drought stress | 9.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.841 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.900 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.671 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.650 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.436 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.501 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.441 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.803 |
| SRR2868004 | Drought Stress (root) | 18.385 |
| SRR2967015 | Control (root) | 19.415 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.415 |
| SRR9715740 | Leaf | 12.668 |
| SRR9715741 | Leaf | 8.141 |
| SRR9715739 | Root | 16.557 |
| SRR9715742 | Root | 11.749 |
| SRR9715743 | Root | 11.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.953 |
| SRR8749028 | MeJA induced 9h | 11.181 |
| SRR8749029 | MeJA induced 9h | 6.512 |
| SRR8749030 | Uninduced | 6.840 |
| SRR8749031 | Uninduced | 3.091 |
| SRR8749032 | Uninduced | 2.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.630 |
| SRR8400027 | Control - Root | 27.717 |