Gene detail information of Glyur000853s00029664 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14240.1 | 1.00E-180 | CBS domain-containing protein with a domain of unknown function (DUF21) |
| NR | XP_003529609.1 | 0 | PREDICTED: DUF21 domain-containing protein At4g14240-like [Glycine max] |
| COG | YP_007984945.1 | 6.00E-30 | membrane protein of unknown function [Candidatus Saccharimonas aalborgensis] |
| Swissprot | tr|Q4V3C7|Y4423_ARATH | 0 | DUF21 domain-containing protein At4g14230 |
| trEMBL | tr|I1KN82|I1KN82_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G38600.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00853 | 25157 | 29818 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000853s00029664.1 | PF01595.15 | DUF21 | 93 | 257 | 7.60E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.365 |
| SRR1783600 | control | 21.201 |
| SRR1783602 | moderate drought stress | 26.300 |
| SRR1811619 | moderate drought stress | 25.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.226 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.926 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.417 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.777 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.550 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.946 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.050 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.719 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 64.548 |
| SRR2868004 | Drought Stress (root) | 62.962 |
| SRR2967015 | Control (root) | 60.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.831 |
| SRR9715740 | Leaf | 26.842 |
| SRR9715741 | Leaf | 33.473 |
| SRR9715739 | Root | 13.061 |
| SRR9715742 | Root | 30.964 |
| SRR9715743 | Root | 25.342 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.346 |
| SRR8749028 | MeJA induced 9h | 7.961 |
| SRR8749029 | MeJA induced 9h | 6.034 |
| SRR8749030 | Uninduced | 6.070 |
| SRR8749031 | Uninduced | 2.786 |
| SRR8749032 | Uninduced | 3.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.151 |
| SRR8400027 | Control - Root | 34.320 |