Gene detail information of Glyur000851s00032131.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68360.1 | 9.00E-14 | C2H2 and C2HC zinc fingers superfamily protein |
| NR | XP_004504507.1 | 8.84E-113 | PREDICTED: zinc finger protein 5-like [Cicer arietinum] |
| Swissprot | tr|Q39264|ZFP5_ARATH | 1.00E-15 | Zinc finger protein 5 |
| trEMBL | tr|V7CKS2|V7CKS2_PHAVU | 8.00E-110 | Uncharacterized protein {ECO:0000313|EMBL:ESW29506.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00851 | 66884 | 67666 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
| EAR motif-containing Proteins | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.825 |
| SRR1783600 | control | 20.955 |
| SRR1783602 | moderate drought stress | 17.544 |
| SRR1811619 | moderate drought stress | 14.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.492 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.508 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.486 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.390 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.252 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.258 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.119 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 61.233 |
| SRR2868004 | Drought Stress (root) | 166.690 |
| SRR2967015 | Control (root) | 144.279 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.085 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 7.891 |
| SRR9715742 | Root | 15.174 |
| SRR9715743 | Root | 10.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 53.508 |
| SRR8749028 | MeJA induced 9h | 184.523 |
| SRR8749029 | MeJA induced 9h | 71.999 |
| SRR8749030 | Uninduced | 92.013 |
| SRR8749031 | Uninduced | 378.383 |
| SRR8749032 | Uninduced | 99.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 77.748 |
| SRR8400027 | Control - Root | 68.044 |