Gene detail information of Glyur000849s00021647 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21410.1 | 1.00E-41 | cysteine-rich RLK (RECEPTOR-like protein kinase) 29 |
| NR | KEH43969.1 | 3.17E-115 | cysteine-rich RLK (receptor-like kinase) protein [Medicago truncatula] |
| Swissprot | tr|Q8S9L6|CRK29_ARATH | 9.00E-47 | Cysteine-rich receptor-like protein kinase 29 (Precursor) |
| trEMBL | tr|A0A072VPN3|A0A072VPN3_MEDTR | 1.00E-115 | Cysteine-rich RLK (Receptor-like kinase) protein {ECO:0000313|EMBL:KEH43969.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00849 | 107456 | 109229 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000849s00021647.1 | PF01657.12 | Stress-antifung | 34 | 134 | 1.00E-20 |
| Glyur000849s00021647.1 | PF01657.12 | Stress-antifung | 147 | 237 | 2.60E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.147 |
| SRR1783600 | control | 4.723 |
| SRR1783602 | moderate drought stress | 2.459 |
| SRR1811619 | moderate drought stress | 2.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.664 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.536 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.069 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.068 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.285 |
| SRR2868004 | Drought Stress (root) | 11.517 |
| SRR2967015 | Control (root) | 10.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.020 |
| SRR9715741 | Leaf | 0.034 |
| SRR9715739 | Root | 0.031 |
| SRR9715742 | Root | 1.571 |
| SRR9715743 | Root | 1.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.040 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.040 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.286 |
| SRR8400027 | Control - Root | 2.130 |