Gene detail information of Glyur000849s00021638 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G50020.1 | 5.00E-43 | |
| NR | KEH43992.1 | 1.67E-97 | tubulin alpha-6 chain, putative [Medicago truncatula] |
| trEMBL | tr|A0A072VQC5|A0A072VQC5_MEDTR | 6.00E-98 | Tubulin alpha-6 chain, putative {ECO:0000313|EMBL:KEH43992.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00849 | 59903 | 62651 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 22.796 |
| SRR1783600 | control | 24.335 |
| SRR1783602 | moderate drought stress | 23.724 |
| SRR1811619 | moderate drought stress | 24.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.400 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.792 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 36.826 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 35.227 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.475 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 33.398 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 111.234 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 113.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.546 |
| SRR2868004 | Drought Stress (root) | 33.419 |
| SRR2967015 | Control (root) | 30.827 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 82.843 |
| SRR9715740 | Leaf | 115.147 |
| SRR9715741 | Leaf | 93.993 |
| SRR9715739 | Root | 10.035 |
| SRR9715742 | Root | 15.560 |
| SRR9715743 | Root | 15.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.133 |
| SRR8749028 | MeJA induced 9h | 25.449 |
| SRR8749029 | MeJA induced 9h | 27.563 |
| SRR8749030 | Uninduced | 12.635 |
| SRR8749031 | Uninduced | 8.165 |
| SRR8749032 | Uninduced | 8.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.729 |
| SRR8400027 | Control - Root | 39.442 |