Gene detail information of Glyur000849s00021624 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G49975.1 | 3.00E-26 | |
| NR | XP_003536572.1 | 1.74E-67 | PREDICTED: uncharacterized protein LOC100800755 [Glycine max] |
| trEMBL | tr|I1LED1|I1LED1_SOYBN | 6.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G40210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00849 | 5833 | 7149 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000849s00021624.1 | PF05479.6 | PsaN | 31 | 95 | 4.30E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.076 |
| SRR1783600 | control | 0.037 |
| SRR1783602 | moderate drought stress | 0.040 |
| SRR1811619 | moderate drought stress | 0.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 55.677 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 55.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.637 |
| SRR2868004 | Drought Stress (root) | 0.911 |
| SRR2967015 | Control (root) | 0.761 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.584 |
| SRR9715740 | Leaf | 42.952 |
| SRR9715741 | Leaf | 21.922 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.074 |
| SRR8749028 | MeJA induced 9h | 0.069 |
| SRR8749029 | MeJA induced 9h | 0.127 |
| SRR8749030 | Uninduced | 0.364 |
| SRR8749031 | Uninduced | 0.955 |
| SRR8749032 | Uninduced | 0.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.351 |
| SRR8400027 | Control - Root | 0.378 |