Gene detail information of Glyur000848s00029428 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08330.1 | 4.00E-15 | |
| NR | AFK48244.1 | 1.40E-70 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9STN5|Y4833_ARATH | 1.00E-50 | Uncharacterized protein At4g08330, chloroplastic (Precursor) |
| trEMBL | tr|I3T6V2|I3T6V2_LOTJA | 5.00E-71 | Uncharacterized protein {ECO:0000313|EMBL:AFK48244.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00848 | 107594 | 109501 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.932 |
| SRR1783600 | control | 1.847 |
| SRR1783602 | moderate drought stress | 2.175 |
| SRR1811619 | moderate drought stress | 2.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.846 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.307 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.816 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.007 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.940 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 14.448 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.865 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.314 |
| SRR2868004 | Drought Stress (root) | 1.455 |
| SRR2967015 | Control (root) | 0.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.453 |
| SRR9715740 | Leaf | 3.803 |
| SRR9715741 | Leaf | 2.977 |
| SRR9715739 | Root | 0.596 |
| SRR9715742 | Root | 2.388 |
| SRR9715743 | Root | 0.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.060 |
| SRR8749029 | MeJA induced 9h | 0.087 |
| SRR8749030 | Uninduced | 0.389 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.081 |
| SRR8400027 | Control - Root | 2.353 |