Gene detail information of Glyur000848s00029422 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G24960.2 | 2.00E-07 | |
| NR | KHN21833.1 | 2.42E-64 | hypothetical protein glysoja_033692 [Glycine soja] |
| trEMBL | tr|K7MC33|K7MC33_SOYBN | 3.00E-73 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G19533.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00848 | 44574 | 47170 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000848s00029422.1 | PF12776.2 | Myb_DNA-bind_3 | 22 | 115 | 2.20E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.103 |
| SRR1783600 | control | 0.060 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.080 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.102 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.211 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.360 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.572 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.078 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.517 |
| SRR8749028 | MeJA induced 9h | 8.788 |
| SRR8749029 | MeJA induced 9h | 7.562 |
| SRR8749030 | Uninduced | 2.560 |
| SRR8749031 | Uninduced | 6.440 |
| SRR8749032 | Uninduced | 3.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.097 |
| SRR8400027 | Control - Root | 0.066 |