Gene detail information of Glyur000846s00019248 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20730.3 | 6.00E-17 | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related |
| NR | XP_009362016.1 | 1.47E-46 | PREDICTED: auxin response factor 19-like [Pyrus x bretschneideri] |
| Swissprot | tr|Q6Z2W3|ARFE_ORYSJ | 2.00E-24 | Auxin response factor 5 |
| trEMBL | tr|K7K114|K7K114_SOYBN | 2.00E-39 | Auxin response factor {ECO:0000256|RuleBase:RU004561} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00846 | 35936 | 37250 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.441 |
| SRR1783600 | control | 12.749 |
| SRR1783602 | moderate drought stress | 17.394 |
| SRR1811619 | moderate drought stress | 16.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.613 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.217 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.547 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.902 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.797 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.456 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.270 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.421 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.900 |
| SRR2868004 | Drought Stress (root) | 36.659 |
| SRR2967015 | Control (root) | 29.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.139 |
| SRR9715740 | Leaf | 8.591 |
| SRR9715741 | Leaf | 12.684 |
| SRR9715739 | Root | 4.674 |
| SRR9715742 | Root | 13.900 |
| SRR9715743 | Root | 15.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 46.445 |
| SRR8749028 | MeJA induced 9h | 25.937 |
| SRR8749029 | MeJA induced 9h | 25.571 |
| SRR8749030 | Uninduced | 12.832 |
| SRR8749031 | Uninduced | 7.020 |
| SRR8749032 | Uninduced | 11.791 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.276 |
| SRR8400027 | Control - Root | 31.462 |