Gene detail information of Glyur000845s00034028 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17900.1 | 4.00E-37 | |
| NR | XP_007153850.1 | 4.50E-77 | hypothetical protein PHAVU_003G0698000g, partial [Phaseolus vulgaris] |
| trEMBL | tr|V7C6U0|V7C6U0_PHAVU | 2.00E-77 | Uncharacterized protein {ECO:0000313|EMBL:ESW25844.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00845 | 44469 | 48669 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.749 |
| SRR1783600 | control | 18.027 |
| SRR1783602 | moderate drought stress | 17.830 |
| SRR1811619 | moderate drought stress | 18.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.289 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.175 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.326 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.242 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.071 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.758 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.480 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.882 |
| SRR2868004 | Drought Stress (root) | 11.467 |
| SRR2967015 | Control (root) | 11.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.274 |
| SRR9715740 | Leaf | 11.930 |
| SRR9715741 | Leaf | 10.288 |
| SRR9715739 | Root | 2.808 |
| SRR9715742 | Root | 9.680 |
| SRR9715743 | Root | 6.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.247 |
| SRR8749028 | MeJA induced 9h | 12.431 |
| SRR8749029 | MeJA induced 9h | 10.744 |
| SRR8749030 | Uninduced | 7.479 |
| SRR8749031 | Uninduced | 2.326 |
| SRR8749032 | Uninduced | 4.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.524 |
| SRR8400027 | Control - Root | 16.546 |