Gene detail information of Glyur000844s00023280 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22390.1 | 1.00E-12 | Protein of unknown function (DUF3049) |
| NR | XP_003596832.1 | 7.40E-109 | hypothetical protein MTR_2g086590 [Medicago truncatula] |
| trEMBL | tr|G7ITU4|G7ITU4_MEDTR | 3.00E-109 | DUF3049 family protein {ECO:0000313|EMBL:AES67083.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00844 | 94498 | 95793 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000844s00023280.1 | PF11250.3 | DUF3049 | 193 | 247 | 2.60E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.114 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.012 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.331 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.090 |
| SRR2868004 | Drought Stress (root) | 0.090 |
| SRR2967015 | Control (root) | 0.233 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 52.535 |
| SRR9715740 | Leaf | 23.794 |
| SRR9715741 | Leaf | 39.815 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.210 |
| SRR9715743 | Root | 0.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.109 |
| SRR8400027 | Control - Root | 0.036 |