Gene detail information of Glyur000844s00023265 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22320.1 | 4.00E-77 | Leucine-rich repeat (LRR) family protein |
| NR | XP_004487476.1 | 0 | PREDICTED: leucine-rich repeat-containing protein 9-like isoform X1 [Cicer arietinum] |
| COG | YP_004508864.1 | 9.00E-19 | leucine-rich protein [Porphyromonas gingivalis TDC60] |
| Swissprot | tr|Q09JZ4|DAAF1_CHLRE | 1.00E-10 | Leucine-rich repeat-containing protein ODA7 |
| trEMBL | tr|C6TGI7|C6TGI7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G39110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00844 | 26729 | 30863 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000844s00023265.1 | PF12799.2 | LRR_4 | 64 | 102 | 1.60E-06 |
| Glyur000844s00023265.1 | PF13855.1 | LRR_8 | 108 | 164 | 1.80E-06 |
| Glyur000844s00023265.1 | PF12799.2 | LRR_4 | 177 | 217 | 8.70E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.403 |
| SRR1783600 | control | 17.543 |
| SRR1783602 | moderate drought stress | 22.158 |
| SRR1811619 | moderate drought stress | 22.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.963 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.466 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.631 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.037 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.985 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 33.940 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.117 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.129 |
| SRR2868004 | Drought Stress (root) | 14.839 |
| SRR2967015 | Control (root) | 21.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.382 |
| SRR9715740 | Leaf | 13.666 |
| SRR9715741 | Leaf | 10.631 |
| SRR9715739 | Root | 1.692 |
| SRR9715742 | Root | 6.804 |
| SRR9715743 | Root | 7.070 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 52.286 |
| SRR8749028 | MeJA induced 9h | 35.092 |
| SRR8749029 | MeJA induced 9h | 35.419 |
| SRR8749030 | Uninduced | 3.788 |
| SRR8749031 | Uninduced | 1.729 |
| SRR8749032 | Uninduced | 10.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.880 |
| SRR8400027 | Control - Root | 29.054 |