Gene detail information of Glyur000843s00027196 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004489615.1 | 9.15E-42 | PREDICTED: uncharacterized protein LOC101507018 [Cicer arietinum] |
| trEMBL | tr|V7BVT5|V7BVT5_PHAVU | 4.00E-39 | Uncharacterized protein {ECO:0000313|EMBL:ESW21140.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00843 | 108770 | 109282 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.060 |
| SRR1783600 | control | 1.013 |
| SRR1783602 | moderate drought stress | 2.477 |
| SRR1811619 | moderate drought stress | 2.832 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.100 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.589 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.653 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.637 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.275 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.524 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.328 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.978 |
| SRR2868004 | Drought Stress (root) | 3.254 |
| SRR2967015 | Control (root) | 1.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.106 |
| SRR9715740 | Leaf | 11.701 |
| SRR9715741 | Leaf | 17.787 |
| SRR9715739 | Root | 60.592 |
| SRR9715742 | Root | 17.972 |
| SRR9715743 | Root | 26.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.062 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.093 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.355 |
| SRR8400027 | Control - Root | 5.334 |