Gene detail information of Glyur000842s00023845 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G18520.1 | 9.00E-176 | Lung seven transmembrane receptor family protein |
| NR | XP_004493910.1 | 0 | PREDICTED: protein GPR107-like [Cicer arietinum] |
| trEMBL | tr|V7CX63|V7CX63_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW34684.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00842 | 82673 | 83884 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000842s00023845.1 | PF06814.8 | Lung_7-TM_R | 98 | 379 | 2.80E-49 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 108.766 |
| SRR1783600 | control | 106.366 |
| SRR1783602 | moderate drought stress | 53.050 |
| SRR1811619 | moderate drought stress | 51.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 83.758 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 83.007 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.266 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.745 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 78.204 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 80.033 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.403 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 55.701 |
| SRR2868004 | Drought Stress (root) | 37.290 |
| SRR2967015 | Control (root) | 33.940 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 43.370 |
| SRR9715740 | Leaf | 20.671 |
| SRR9715741 | Leaf | 36.024 |
| SRR9715739 | Root | 108.533 |
| SRR9715742 | Root | 105.814 |
| SRR9715743 | Root | 92.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.466 |
| SRR8749028 | MeJA induced 9h | 31.802 |
| SRR8749029 | MeJA induced 9h | 32.061 |
| SRR8749030 | Uninduced | 16.883 |
| SRR8749031 | Uninduced | 5.175 |
| SRR8749032 | Uninduced | 8.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.577 |
| SRR8400027 | Control - Root | 59.206 |