Gene detail information of Glyur000842s00023844 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02640.1 | 7.00E-34 | |
| NR | NP_001238054.1 | 6.39E-71 | uncharacterized protein LOC100527315 [Glycine max] |
| trEMBL | tr|C6T3Y6|C6T3Y6_SOYBN | 2.00E-71 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU16387.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00842 | 77194 | 77661 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.312 |
| SRR1783600 | control | 0.230 |
| SRR1783602 | moderate drought stress | 0.651 |
| SRR1811619 | moderate drought stress | 0.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.812 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.886 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.560 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.631 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.795 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.568 |
| SRR2868004 | Drought Stress (root) | 8.272 |
| SRR2967015 | Control (root) | 7.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.219 |
| SRR9715740 | Leaf | 0.204 |
| SRR9715741 | Leaf | 0.223 |
| SRR9715739 | Root | 0.426 |
| SRR9715742 | Root | 1.452 |
| SRR9715743 | Root | 1.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.215 |
| SRR8749029 | MeJA induced 9h | 0.544 |
| SRR8749030 | Uninduced | 1.007 |
| SRR8749031 | Uninduced | 2.661 |
| SRR8749032 | Uninduced | 5.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.400 |
| SRR8400027 | Control - Root | 6.841 |