Gene detail information of Glyur000842s00023836 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G53490.1 | 1.00E-54 | |
| NR | XP_003625528.1 | 4.83E-126 | hypothetical protein MTR_7g100150 [Medicago truncatula] |
| trEMBL | tr|G7L0N1|G7L0N1_MEDTR | 2.00E-126 | Transmembrane protein, putative {ECO:0000313|EMBL:AES81746.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00842 | 40061 | 43055 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.894 |
| SRR1783600 | control | 11.049 |
| SRR1783602 | moderate drought stress | 13.181 |
| SRR1811619 | moderate drought stress | 13.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.209 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.027 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.193 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.103 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 55.154 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.075 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.675 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.246 |
| SRR2868004 | Drought Stress (root) | 17.126 |
| SRR2967015 | Control (root) | 16.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.350 |
| SRR9715740 | Leaf | 32.292 |
| SRR9715741 | Leaf | 45.911 |
| SRR9715739 | Root | 8.814 |
| SRR9715742 | Root | 25.601 |
| SRR9715743 | Root | 19.145 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.482 |
| SRR8749028 | MeJA induced 9h | 31.139 |
| SRR8749029 | MeJA induced 9h | 41.713 |
| SRR8749030 | Uninduced | 47.173 |
| SRR8749031 | Uninduced | 58.701 |
| SRR8749032 | Uninduced | 46.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.606 |
| SRR8400027 | Control - Root | 16.609 |