Gene detail information of Glyur000842s00023834 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58090.1 | 8.00E-33 | Disease resistance-responsive (dirigent-like protein) family protein |
| NR | XP_003554345.1 | 2.30E-70 | PREDICTED: dirigent protein 17-like [Glycine max] |
| Swissprot | tr|F4J4N3|DIR17_ARATH | 1.00E-40 | Dirigent protein 17 |
| trEMBL | tr|I1NA34|I1NA34_SOYBN | 9.00E-71 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G36020.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00842 | 31719 | 32201 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.876 |
| SRR1783600 | control | 2.684 |
| SRR1783602 | moderate drought stress | 1.455 |
| SRR1811619 | moderate drought stress | 1.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.263 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.602 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.234 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.856 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.414 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.391 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.059 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.302 |
| SRR2868004 | Drought Stress (root) | 17.994 |
| SRR2967015 | Control (root) | 13.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.437 |
| SRR9715740 | Leaf | 16.315 |
| SRR9715741 | Leaf | 11.680 |
| SRR9715739 | Root | 2.625 |
| SRR9715742 | Root | 5.009 |
| SRR9715743 | Root | 5.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 33.070 |
| SRR8749028 | MeJA induced 9h | 19.342 |
| SRR8749029 | MeJA induced 9h | 25.235 |
| SRR8749030 | Uninduced | 11.896 |
| SRR8749031 | Uninduced | 19.147 |
| SRR8749032 | Uninduced | 11.190 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.070 |
| SRR8400027 | Control - Root | 11.637 |