Gene detail information of Glyur000841s00026269 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70890.1 | 5.00E-33 | MLP-like protein 43 |
| NR | XP_003626964.1 | 1.55E-71 | MLP-like protein [Medicago truncatula] |
| Swissprot | tr|Q9SSK5|MLP43_ARATH | 6.00E-43 | MLP-like protein 43 |
| trEMBL | tr|G7LFU4|G7LFU4_MEDTR | 6.00E-72 | Polyketide cyclase/dehydrase and lipid transporter {ECO:0000313|EMBL:AET01440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00841 | 71152 | 74836 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000841s00026269.1 | PF00407.14 | Bet_v_1 | 8 | 159 | 5.10E-49 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 70.974 |
| SRR1783600 | control | 71.662 |
| SRR1783602 | moderate drought stress | 98.590 |
| SRR1811619 | moderate drought stress | 97.491 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 27.935 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.024 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.121 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.119 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.206 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.626 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 191.299 |
| SRR2868004 | Drought Stress (root) | 318.491 |
| SRR2967015 | Control (root) | 476.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.459 |
| SRR9715740 | Leaf | 0.741 |
| SRR9715741 | Leaf | 1.000 |
| SRR9715739 | Root | 109.084 |
| SRR9715742 | Root | 108.561 |
| SRR9715743 | Root | 110.867 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 139.710 |
| SRR8400027 | Control - Root | 221.927 |