Gene detail information of Glyur000841s00026265 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70890.1 | 3.00E-28 | MLP-like protein 43 |
| NR | AFK35144.1 | 4.45E-73 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9SSK5|MLP43_ARATH | 2.00E-34 | MLP-like protein 43 |
| trEMBL | tr|I3S4F2|I3S4F2_LOTJA | 2.00E-73 | Uncharacterized protein {ECO:0000313|EMBL:AFK35144.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00841 | 59672 | 62107 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000841s00026265.1 | PF00407.14 | Bet_v_1 | 6 | 152 | 9.10E-46 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.051 |
| SRR1811619 | moderate drought stress | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.143 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.138 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.145 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.147 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 88.384 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 87.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.197 |
| SRR2868004 | Drought Stress (root) | 0.132 |
| SRR2967015 | Control (root) | 0.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 89.360 |
| SRR9715740 | Leaf | 23.681 |
| SRR9715741 | Leaf | 39.188 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.235 |
| SRR8400027 | Control - Root | 0.441 |