Gene detail information of Glyur000837s00027498 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23160.1 | 1.00E-175 | Protein of unknown function (DUF668) |
| NR | KHN30736.1 | 0 | hypothetical protein glysoja_034079 [Glycine soja] |
| trEMBL | tr|I1LCD3|I1LCD3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G33200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00837 | 104978 | 106744 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000837s00027498.1 | PF11961.3 | DUF3475 | 45 | 101 | 2.90E-24 |
| Glyur000837s00027498.1 | PF05003.7 | DUF668 | 419 | 508 | 1.70E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.555 |
| SRR1783600 | control | 0.565 |
| SRR1783602 | moderate drought stress | 0.340 |
| SRR1811619 | moderate drought stress | 0.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.286 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.264 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.245 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.588 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.456 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.680 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.341 |
| SRR2868004 | Drought Stress (root) | 12.170 |
| SRR2967015 | Control (root) | 12.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.781 |
| SRR9715740 | Leaf | 2.455 |
| SRR9715741 | Leaf | 4.759 |
| SRR9715739 | Root | 0.282 |
| SRR9715742 | Root | 2.617 |
| SRR9715743 | Root | 2.980 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.664 |
| SRR8749028 | MeJA induced 9h | 10.002 |
| SRR8749029 | MeJA induced 9h | 7.757 |
| SRR8749030 | Uninduced | 3.684 |
| SRR8749031 | Uninduced | 8.752 |
| SRR8749032 | Uninduced | 6.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.472 |
| SRR8400027 | Control - Root | 3.849 |