Gene detail

Gene detail information of Glyur000837s00027495

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G23150.1	0	Signal transduction histidine kinase, hybrid-type, ethylene sensor
NR	XP_004495309.1	0	PREDICTED: ethylene receptor 2-like [Cicer arietinum]
COG	YP_001520229.1	4.00E-42	two-component hybrid sensor and regulator histidine kinase [Acaryochloris marina MBIC11017]
Swissprot	tr\|Q0WPQ2\|ETR2_ARATH	0	Ethylene receptor 2
trEMBL	tr\|A0A072VX71\|A0A072VX71_MEDTR	0	Ethylene receptor ETR2 {ECO:0000313\|EMBL:KEH42695.1}

Sequence

Transcript Sequence

>Glyur000837s00027495.1
CTTTCCCTTACGTGGTTTGTGGTTTGGCATTGCTAAATAGACAAAGGGTATTGAATGCTCAAAAGGTTAATAAGATTCCCCTTCACACACCAAGCACAAAACTCCATTTTTCTTCATCTGGCTGTGGCGTAGGGACTGTGTTTTTTTCTTCTCTGGCTTTGAAAACTAGGCTCTGGAAGCCTTTGGGACACGCCCCGTTTCGTGCTGCAGCACCTTGTTGCATAGTAAAGATGGGATTTTTTTTTAATTGATGTGTTTGGGGTTTAGTGCCTCCTCTGGTGGGTTGCTTTTCTCTTTGTTCTTCCCAATGGTGGTGGAGGGTTTTGTTTAAGATCTGATGAAGGTGGAATATCTGATTGCATTAAGAGGCTTTATTTCTTCAGGGCAAGACGGGTAGAAATTGCTGAAGACTTTTCTTGTTTTCTAGCTTAGTTATTATACTGGGGTATGGCTATGGCCCATTGATTTATATCCTTAGATGGATTGAAGCATCAGNAGCATATTGGATCAATGTTAAAAGCAGTAGCATCTGTGCTGTTGATTACCTCTATCCTCCTATGTGTATCTGCAAGTGCAACAGATAACGGATTTCCTAGATGTAACTGTGATGATGAGGCCAGTTTGTGGACTATTGAGAGCATTCTGGAGTGTCAGAGGGTTGGAGATTTCTTGATTGCTGTGGCCTACTTCTCCATCCCTATTGAGCTTCTCTACTTTGTCAGTTGCTCAAACGTCCCATTCAAATGGGTCCTTATTCAGTTCATTGCCTTCATTGTACTATGTGGATTGACACACTTGCTGAATGGGTGGACTTATGGTCCTCACACTTTTCAGCTCATGGTGGCACTTACTGTCTTCAAAATCCTCACTGCCTTGGTGTCTTGTGCCACTGCTATAACTCTCATCACTTTGATCCCTTTGCTCCTCAAAGTGAAGGTCAGAGAATTCATGCTGAAGAAAAAGACCTGGGATCTTGGNAGGGAGGTTGGTATTATTATGAAGCAAAAGGAGGCTGCAATGCATGTGAGGATGCTCACTNAAGAGATTCGCAAGTCGCTCGATAGGCACACGATTCTNTACACCACTTTGGTGGAGCTGTCCAAAACACTGGGCTTGCAAAATTGTGCTGTGTGGATGCCCAATGTTGATAAGACAGAGATGAACCTTACTCATGAGTTGAATGGGAGAAATTTTAATTTTTCTATACCCATCACTGATCCAGATGTTGTAAGAATTAAGGGAAGCGATGGGGTGAATATACTAAGGTCTGACTCAGCACTTGCTGTTGCCAGTTGTGGAGTTTCTGGTGAGGCAGGACCANTTGCTGCAATCCGAATGCCAATGCTACGGGTTTGTAATTTCAAAGGAGGAACACCCGAGCTAACTCAGGNGTGTTATGCAATATTGGTTTTGATTCTTCCGATTGGAGAGCCTAGATCTTGGAGCAATCAGGAACTGGAGATAATTAAGGTGGTTGCTGATCAAGTCGCTGTGGCTCTATCCCATGCTGCGATTCTTGAAGAGTCCCAACTCATGAGAGAGAAGTTGGAGGAGCGAAATCGAGCTTTGCAACAGGCAAAAAGGAATGCTTTGATGGCAAGCCAGGCGAGAAACGCGTTTCAGAAAGTCATGAGTGATGGTATGAGGAGGCCAATGCACTCAATTTTGGGATTGCTTTCAATGATACAGGATGATAATCTAAATAATGAACAGAAACTTATTGTGGATGCAATGCTAAGGACTAGCAATGTCCTCTCAAACTTGATAAATGATGCCATGGACAGCTCTGCAAAGGATGATGGAAGATTTCCTTTGGAGATAAGGTCTTTTGGGTTGCATTCCATGATAAAGGAAGCAGCNTGCCTCGCCAAGTGCATGTGTGTTTATCGGGGCTTGGGTTTTATGGTCGAGGTTGAGAAGTCTTTACCCGACAATGTTATGGGCGATGAAAGGAGGGTTTTTCAGGTGATTTTGCATATGGTTGGGAACCTACTGGATTGTAAACATGGGGAAGGGGGGATCCTTGTATTTCGGGTTTTGGCAGAGACTGGAAGTCAAGGAAGGAATGATAAAGGGTGGGCATCCTGGAGANCAAGCTCATCTAGTGGTGATGTAAATATTAGATTTGAGATAGGGATCAACAATAGTGATTCTGAAGTTGGGAGCTCAGTTTCTTCAGGACTTGGGGGTAGGAAATACACCAGCGATAGGTTCGAGGGCAGATTGAGCTTTAGTATTTGCAAGAGGATAGTCCAGTTGATGCAAGGGAACTTATGGTTGGTACCATGCACTCGTGGTTTTCCTCAAAGCATGACACTTCTTCTCCGGTTTCAATTACGACCATCCATCGCCATAGCCATCTCTGAACCCGGAGAATCTTCAGAACGTACCAATTCCNATTCAATGCTGAGAGGTCTGCAAGTTCTGTTGGTGGACAGTGATGATATAAATAGAGCAGTGACCCAAAGATTGCTTCAGAAACTGGGTTGTGCTGTAACTTGTGTTTCTTCAGGATTTGAATGCCTCACTGTCATTGGGCCTGCTGGATCTTCTANTCAAGTCATTCTTTTGGATCTCCACATGCCTGACATAGATGGCTTCGAAGTTGCCACAAGGATTNGGAAGTTCAAAAGCGGAAATAGGCCCATCATTGTTGCCTTGACTGCAGGCGCAGAAGAAGATTTGTGGGAAAGATGCATGCAAATTGGTGTTAATGGGGTTATCCGAAAACCAGTTTTGTTGCATGGAATTGCTAGTGAACTCAGAAGAATCCTGATGCAGGGAAATAATGTTGTCCTGTGAAAAATGAACATGGAGGGTGCAAGTTAAGACACTTAAGCATCTAGTACTTGAAAGGTTATTTCAAGTCATATTTTGGTAGAATTATAGAACACAAGCACTCTCTGGCTCTCCCATGCTAGCAATTTTCAACCTAGAGATGTTATACATACGACTTTCATAAGAAAAAAAAAATGGTATACAGATTAGTCCCTTTCTTTCAATGTGTTTNTGTTGTTATTGCCATGTATGAAAATGAAATCTCAAATCTCGAACACGTGTCTTCAGAGAACACACATCCATTAGTTATAAGAATGACATAAAATATAATTTAATTTTTTTGTTC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00837	63708	68101	+

Gene family

Gene family	subfamily
Transcription Factors Family	Orphans

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14509	ETR, ERS	EC:2.7.13.-	MAPK signaling pathway - plant	map04016
			MAPK signaling pathway - plant	map04016
			Plant hormone signal transduction	map04075
			Plant hormone signal transduction	map04075

Gene Ontology

biological_process

GO:0000160 phosphorelay signal transduction system

GO:0007165 signal transduction

GO:0009873 ethylene-activated signaling pathway

cellular_component

GO:0005789 endoplasmic reticulum membrane

GO:0016020 membrane

molecular_function

GO:0000155 phosphorelay sensor kinase activity

GO:0004673 protein histidine kinase activity

GO:0004871 signal transducer activity

GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000837s00027495.1	PF01590.21	GAF	184	330	1.20E-08
Glyur000837s00027495.1	PF00512.20	HisKA	367	430	2.30E-07
Glyur000837s00027495.1	PF00072.19	Response_reg	638	742	1.70E-17
Glyur000837s00027495.2	PF01590.21	GAF	184	330	1.20E-08
Glyur000837s00027495.2	PF00512.20	HisKA	367	430	2.30E-07
Glyur000837s00027495.2	PF00072.19	Response_reg	638	742	1.70E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.836
SRR1783600	control	12.869
SRR1783602	moderate drought stress	7.854
SRR1811619	moderate drought stress	7.972

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.639
DRR006520	Root Summer glycyrrhizin high producing strain	10.571
DRR006521	Root Winter glycyrrhizin high producing strain	96.521
DRR006522	Root Winter glycyrrhizin high producing strain	93.945
DRR006523	Root Summer glycyrrhizin low producing strain	27.711
DRR006524	Root Summer glycyrrhizin low producing strain	27.755
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.809
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.746

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	26.768
SRR2868004	Drought Stress (root)	32.963
SRR2967015	Control (root)	21.850

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.129
SRR9715740	Leaf	3.756
SRR9715741	Leaf	3.696
SRR9715739	Root	8.829
SRR9715742	Root	27.001
SRR9715743	Root	22.973

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	71.244
SRR8749028	MeJA induced 9h	116.895
SRR8749029	MeJA induced 9h	69.631
SRR8749030	Uninduced	54.005
SRR8749031	Uninduced	78.459
SRR8749032	Uninduced	67.835

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	39.017
SRR8400027	Control - Root	45.581